API Reference

Average Nucleotide Identity

pyfastani.Sketch	An index computing minimizers over the reference genomes.
pyfastani.Mapper	A genome mapper using Murmur3 hashes and k-mers to compute ANI.

Minimizers

pyfastani.Minimizers	A read-only view over the minimizers of a Sketch or a Mapper.
pyfastani.MinimizerInfo	The information about a single minimizer.
pyfastani.MinimizerIndex	The index mapping minimizer hash values to their positions.

Miscellaneous

pyfastani.Hit	A single hit found when querying a Mapper with a genome.
pyfastani.Position